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Homepage Overview

The homepage serves as the central hub for the BlackPepKB, providing quick access to all resources and features.

Main Features:

  • Navigation Bar: Located at the top of every page, providing access to all major sections.
  • Banner Section: Highlights the platform's purpose as a translational genomics resource.
  • Introduction: Overview of BlackPepKB and its role in consolidating Piper nigrum data.
  • Background Information: Interactive tab-based layout with sections on:
    • Classification (with color-coded taxonomy levels)
    • Economic significance
    • Cultivation regions
    • Medicinal uses
  • Interactive Production Map: Displays global black pepper production trends (2000-2022).
  • Tools & Databases Section: Card-based layout featuring eight specialized utilities.

Navigation Menu

The top navigation menu provides quick access to all major sections:

  • Home: Returns to the main landing page.
  • Browse: Access gene families, SNP markers, and other data collections.
  • Tools: Access bioinformatics tools including eFP Browser, BLAST, and JBrowse.
  • Help: Documentation and user assistance resources.
  • Contact: Communication portal for reaching the database team.
Top Navigation Bar

Quick Navigation

The quick links section provides direct access to all tools and resources.

Quick Links

Gene Search

Enter a gene ID (e.g., Pn1.2085) in the search bar located in the header to access the comprehensive gene summary page. The gene details are organized in a four-tab format showing:

  • Gene Details
  • Coding Sequence
  • Protein Sequence
  • Gene Ontology